Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTCACAATCGCAGTAATATCATTGCC
..(((((((((((((((((((&))).)).)))))))))))........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017558
GeneSymbolHYDIN
Binding site1141,1171
Score1.0
Seed1
Au0.588
Energy-18.8
Binding len30
Me-4.957
Phylopstem1.348699655724138
Phylopflank1.4390573753999996
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure