Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAAGCCAAACTACATTGGAGATGGATTTACCTGCCGCGGCAGCAT
.(((.((((((((((((((..&))))))..............................)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017564
GeneSymbolSTAB2
Binding site4951,5000
Score0.846
Seed0
Au0.529
Energy-22.1
Binding len49
Me-7.912
Phylopstem2.800120731818181
Phylopflank1.8484264637499996
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure