Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTCAGTGCCT
....(((((..((((((((...&))))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354523
GeneSymbolUBE3A
Binding site7178,7194
Score0.846
Seed0
Au0.544
Energy-17.1
Binding len16
Me-13.614
Phylopstem6.25637625
Phylopflank5.280792776249999
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure