Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGGGGCCTGCGCCGCCTCCCAGGGCTGCAT
.(((((((((((.(((.((((&.))))))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017570
GeneSymbolOPLAH
Binding site3369,3404
Score0.846
Seed1
Au0.294
Energy-23.0
Binding len27
Me-5.082
Phylopstem1.5876927222222221
Phylopflank1.8096459812499996
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure