Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCGCAGCA
.....(((((((((((.((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017573
GeneSymbolPCSK4
Binding site740,756
Score0.923
Seed0
Au0.368
Energy-26.4
Binding len16
Me-13.666
Phylopstem0.1484085454545455
Phylopflank0.05089420625000002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure