Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTTGCAGCGCT
..((.(((((((..((((((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017578
GeneSymbolROPN1
Binding site718,734
Score1.0
Seed0
Au0.544
Energy-19.1
Binding len16
Me-11.222
Phylopstem2.8713865999999997
Phylopflank2.6848408775000006
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure