Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGTATTCACGTCAGCTGCAGA
(((((((((((...(((((((&))))...)))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017579
GeneSymbolDMBT1
Binding site6618,6644
Score0.923
Seed1
Au0.471
Energy-20.6
Binding len26
Me-9.43
Phylopstem1.60988275
Phylopflank0.7385684620000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure