Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCAGCTGGGCTGTG
..((((((.(((((((..(((&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017579
GeneSymbolDMBT1
Binding site1218,1236
Score0.923
Seed1
Au0.324
Energy-20.7
Binding len18
Me-6.013
Phylopstem2.8719992142857143
Phylopflank0.5513488862499996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure