Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGTCAACCGTAGCA
.....((((((((((..(((.&))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017579
GeneSymbolDMBT1
Binding site229,248
Score0.846
Seed0
Au0.485
Energy-20.3
Binding len19
Me-13.899
Phylopstem-1.00021
Phylopflank-0.6469140775000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure