Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCTGCTTCCAGACTGAGAGCTGCAGA
((((((((.((((((((((((&)))))))........)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017581
GeneSymbolCHRNA9
Binding site175,206
Score0.846
Seed1
Au0.515
Energy-20.7
Binding len31
Me-4.994
Phylopstem1.292314805
Phylopflank2.5267861612500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure