Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACCAGCAGTGCAAC
(((((.((((((((((.....&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017581
GeneSymbolCHRNA9
Binding site628,645
Score0.846
Seed0
Au0.515
Energy-19.9
Binding len17
Me-5.839
Phylopstem4.531605272727273
Phylopflank5.7541039645
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure