Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGGAGCGGAGCGGAGCGGAGGATGCAGCAGCCGCAGCCGCAGG
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017582
GeneSymbolUBE2Q1
Binding site84,131
Score1.0
Seed0
Au0.206
Energy-26.7
Binding len18
Me-8.057
Phylopstem1.4474129363636365
Phylopflank1.9192818775
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure