Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGTCGGGG
.(((((((((((..........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017583
GeneSymbolTRIM44
Binding site4789,4801
Score0.923
Seed1
Au0.574
Energy-17.4
Binding len12
Me-6.908
Phylopstem0.12490416363636361
Phylopflank-0.1605182675
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure