Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCACACGGGCCGCGACTACCAGCAGCTGTG
..(((((((((((.((..(((&.)))...)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017584
GeneSymbolMIOX
Binding site709,743
Score0.846
Seed1
Au0.309
Energy-23.0
Binding len23
Me-5.814
Phylopstem3.3198168333333338
Phylopflank4.14403609
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure