Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCAAGTCTGCAGCTGTG
..((((((((((((((..((.&))..))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017586
GeneSymbolCACFD1
Binding site2504,2525
Score0.846
Seed1
Au0.353
Energy-21.9
Binding len21
Me-4.957
Phylopstem-0.872651625
Phylopflank-1.1278748349999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure