Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCGCCGCGGCCGCGAG
((((.(((((((.(((((((.&)))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354538
GeneSymbolUBE3A
Binding site10,30
Score0.846
Seed0
Au0.322
Energy-26.0
Binding len20
Me-9.346
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end7
Position5UTR
2D Structure