Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAATGAAGCGAGCAGCTGCAAA
((((((((((.(((....(((&)))......)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354538
GeneSymbolUBE3A
Binding site791,816
Score1.0
Seed1
Au0.515
Energy-22.7
Binding len25
Me-7.731
Phylopstem1.06772561
Phylopflank0.57504322875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure