Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCGGCGGCTGGCGAC
((((((((((.(((((.....&))))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354538
GeneSymbolUBE3A
Binding site323,341
Score0.846
Seed1
Au0.221
Energy-22.0
Binding len18
Me-6.762
Phylopstem0.33282033636363634
Phylopflank0.62331941625
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure