Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAGTTAATAACTGCAGCTA
....((((((((((((((((.&))))))).......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017599
GeneSymbolVEZT
Binding site2770,2794
Score0.846
Seed0
Au0.735
Energy-19.6
Binding len24
Me-9.547
Phylopstem1.1717875217391307
Phylopflank1.0064783575
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure