Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCACGGCTACAGCTGTC
..(((((((.((((((..(((&)))...)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017599
GeneSymbolVEZT
Binding site2218,2239
Score0.846
Seed1
Au0.441
Energy-18.9
Binding len21
Me-6.2
Phylopstem2.0897004285714287
Phylopflank2.5465732599999993
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure