Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGCGGCTGGCCCGGGGGCGGCGGCGGCGGCTGCC
..((((((((.(((((.....&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017607
GeneSymbolPPP1R12C
Binding site110,148
Score0.846
Seed1
Au0.118
Energy-23.5
Binding len16
Me-7.782
Phylopstem1.91585875
Phylopflank1.1267487885
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure