Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCT
..(((((.((((((....(((&.)))....)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017610
GeneSymbolRNF111
Binding site2215,2252
Score0.923
Seed0
Au0.471
Energy-23.5
Binding len21
Me-8.239
Phylopstem2.6840193333333335
Phylopflank3.965712336
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure