Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCTGGAGCTGTGGA
((((((((.(((.(((.....&))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017612
GeneSymbolZCCHC8
Binding site1607,1624
Score0.846
Seed1
Au0.471
Energy-17.5
Binding len17
Me-6.283
Phylopstem0.935219175
Phylopflank2.2146156087499995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure