Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAAGCAGCTGCGC
.(((((((((..((((.....&)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017615
GeneSymbolNSMCE4A
Binding site493,508
Score0.923
Seed1
Au0.515
Energy-19.9
Binding len15
Me-9.965
Phylopstem2.472252822222222
Phylopflank4.14900641375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure