Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTGTGCCTGTGAGCCGGGC
.((((((.((((..(((.((((&)))).))).)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017617
GeneSymbolNOTCH1
Binding site2248,2269
Score0.846
Seed1
Au0.471
Energy-19.2
Binding len21
Me-8.253
Phylopstem2.6604411666666667
Phylopflank2.1640825875000003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure