Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAATGAAGCGAGCAGCTGCAAA
((((((((((.(((....(((&)))......)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354543
GeneSymbolUBE3A
Binding site1196,1221
Score0.846
Seed1
Au0.515
Energy-22.7
Binding len25
Me-7.731
Phylopstem-0.32112398
Phylopflank-0.23986862249999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure