Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATATATCTACCGACATGCCAGCTGCAT
.((((((((((((((..((((&.))))..)))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017619
GeneSymbolRNPC3
Binding site1340,1369
Score0.846
Seed1
Au0.676
Energy-20.5
Binding len24
Me-4.026
Phylopstem2.34074675
Phylopflank2.7158074524999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure