Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCGGCGGGCTGTGGCAGGAGGGCGGCGGCGGCGGCTGCGGT
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017620
GeneSymbolILF3
Binding site76,120
Score0.846
Seed1
Au0.279
Energy-24.7
Binding len18
Me-6.762
Phylopstem1.2574853999999998
Phylopflank1.74131343125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure