Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACCACCATGTCAAGGCTGCAGT
(((((((((((((.(((((((&))))))).)))..))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017621
GeneSymbolALKBH4
Binding site1982,2009
Score0.923
Seed1
Au0.471
Energy-20.7
Binding len27
Me-4.794
Phylopstem2.7086471777777774
Phylopflank0.6185198350000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure