Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATAATTGCAGCTA
....(((((((((((((....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017634
GeneSymbolKCTD9
Binding site2383,2397
Score0.923
Seed0
Au0.603
Energy-17.5
Binding len14
Me-9.547
Phylopstem6.235877759230769
Phylopflank5.0506636
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure