Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCGGCAGCAT
.(((.(((((((((((.....&))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017636
GeneSymbolTRPM4
Binding site61,77
Score0.846
Seed0
Au0.279
Energy-23.9
Binding len16
Me-7.912
Phylopstem-0.40486904636363624
Phylopflank0.3915322822499999
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure