Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCCGCAGCGCAT
.(((.(((((((..(.(((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017637
GeneSymbolBNC2
Binding site10422,10439
Score1.0
Seed0
Au0.456
Energy-20.8
Binding len17
Me-10.291
Phylopstem4.979534857142857
Phylopflank3.6989574037499997
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure