Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCTTAATTATGCCGGGC
.(((((((((....((((....&)))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354546
GeneSymbolUBE3A
Binding site5203,5222
Score0.846
Seed1
Au0.529
Energy-16.3
Binding len19
Me-12.111
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure