Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGTAAATGTGTGTTGGGA
.(((((((((((((((((....&))))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017645
GeneSymbolHAUS6
Binding site5576,5597
Score0.923
Seed1
Au0.647
Energy-16.7
Binding len21
Me-3.793
Phylopstem1.3959981499999998
Phylopflank1.2460468340000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure