Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATATATGTATGCATGCCGGGTA
(((((((((((((((((.....&))))).))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017646
GeneSymbolTRIT1
Binding site4510,4533
Score0.846
Seed1
Au0.588
Energy-17.1
Binding len23
Me-3.938
Phylopstem4.813299181818182
Phylopflank3.830899551250001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure