Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGAAATGGCTGCCAAGCTGCAT
.(((((((((((((((.....&.))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017646
GeneSymbolTRIT1
Binding site521,547
Score0.923
Seed1
Au0.441
Energy-19.6
Binding len19
Me-3.793
Phylopstem-1.0333291176470587
Phylopflank-0.5004794025
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure