Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGTTGAAAGGATGAAGCCGCAGCTGGAGC
((.(((((((((((.......&.))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017649
GeneSymbolCNNM2
Binding site145,178
Score0.923
Seed0
Au0.353
Energy-22.5
Binding len16
Me-6.464
Phylopstem1.1011170363636364
Phylopflank1.1033126050000002
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end1
Position5UTR
2D Structure