Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACACACGCACACACACTGCAAT
((((((.((((..((((((((&))))))))..))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017650
GeneSymbolPPP1R9A
Binding site8428,8455
Score0.923
Seed0
Au0.632
Energy-21.8
Binding len27
Me-10.117
Phylopstem-0.12628145000000002
Phylopflank0.5228521337499997
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end8
Position3UTR
2D Structure