Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACTGACAAAACTGGGCAGCTGA
...((((((((((((((((((&)))))))......))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017650
GeneSymbolPPP1R9A
Binding site9259,9286
Score0.923
Seed0
Au0.632
Energy-20.9
Binding len27
Me-6.515
Phylopstem1.2399826538461542
Phylopflank0.9502038799999999
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end8
Position3UTR
2D Structure