Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAAAAACTGCAGTTT
....((((((((((.((((((&))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017650
GeneSymbolPPP1R9A
Binding site6304,6323
Score1.0
Seed0
Au0.735
Energy-20.0
Binding len19
Me-10.282
Phylopstem0.13903179999999998
Phylopflank0.4879329662499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure