Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCCGAGGGTGCT
..(((.((.((((((((....&)))))))).)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017650
GeneSymbolPPP1R9A
Binding site3594,3610
Score0.923
Seed0
Au0.515
Energy-19.8
Binding len16
Me-7.914
Phylopstem-0.34783725
Phylopflank0.63373622375
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure