Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCAGGACTGCCACCATTCAGCAGTGCAGA
(((((.((((.((((((((((&)))))))))).................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017653
GeneSymbolDYM
Binding site5215,5252
Score0.846
Seed0
Au0.485
Energy-21.0
Binding len37
Me-8.663
Phylopstem-0.8453046500000001
Phylopflank-0.201413706875
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure