Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAACCCAGCTGGAT
.(.((((((.(((((...(((&)))..))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017654
GeneSymbolSAMD9
Binding site1682,1701
Score0.846
Seed0
Au0.588
Energy-20.1
Binding len19
Me-6.826
Phylopstem0.10046166666666663
Phylopflank0.08382030249999997
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure