Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAATATAGCTGG
...((((((..((((((((..&)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017654
GeneSymbolSAMD9
Binding site3797,3813
Score0.846
Seed0
Au0.618
Energy-17.6
Binding len16
Me-10.582
Phylopstem1.8927277500000002
Phylopflank1.94068832575
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure