Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGGCTGCAAGCTGGAT
.(.(((((((((((((.....&))))))))).)))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017654
GeneSymbolSAMD9
Binding site6550,6567
Score0.808
Seed0
Au0.559
Energy-16.8
Binding len17
Me-5.351
Phylopstem1.0081778000000001
Phylopflank0.55051326625
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure