Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCCCATCGCAGCCGCC
..((.((((((((.(((.(((&))).)))..)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017657
GeneSymbolAFTPH
Binding site251,272
Score0.923
Seed0
Au0.397
Energy-20.5
Binding len21
Me-9.933
Phylopstem1.9537499999999999
Phylopflank1.6071022550000005
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure