Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCCGAAGCCCGGCTGCGGA
(((((((((.((((...((((&))))......))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017659
GeneSymbolQPCTL
Binding site261,285
Score1.0
Seed1
Au0.353
Energy-21.3
Binding len24
Me-6.149
Phylopstem1.0239545866666666
Phylopflank1.2911814444999998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure