Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAATGACCTGCTGGTTTGGGCTGTG
..((((((((((((((((((.&))))))))....)))).......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017662
GeneSymbolTRPM6
Binding site1883,1913
Score1.0
Seed1
Au0.559
Energy-19.5
Binding len30
Me-4.957
Phylopstem0.08999839310344829
Phylopflank0.29952681749999993
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure