Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACCATCTCAGCTGCC
..(((((((.(((.((.(((.&)))..)).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017662
GeneSymbolTRPM6
Binding site264,284
Score0.846
Seed1
Au0.544
Energy-19.2
Binding len20
Me-7.056
Phylopstem0.17978257142857146
Phylopflank0.09282737
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure