Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATTGTTATTCCACCTTATCTTTGCGTCAGGTT
(((((((..(((((((((....&)))))))))...................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017666
GeneSymbolZNF280C
Binding site2525,2561
Score0.846
Seed1
Au0.662
Energy-17.9
Binding len36
Me-7.308
Phylopstem3.064122444444445
Phylopflank2.42098011625
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end4
Position3UTR
2D Structure